# Provides a GUI to several statistical methods useful for causal assessment.

## Documentation for package ‘CADStat’ version 2.2-5

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

bioinfer.JGR | Dialog box for predicting env. conditions from biological observations
bioinfer.new.JGR | Dialog box for predicting env. conditions from biological observations
browseHelp | Launches help in the browser
buildresultsXML | Prepare R output for XML presentation
bxplot.JGR | Dialog box for generating boxplots for data with factor subsets
CADStat.help | Launch browser help files for CADStat
CADStat.update | Update CADStat files
cleanCADStatWorkspace | Clean temporary files from CADStat workspace
conditionalprob.JGR | Dialog box for computing and plotting conditional probabilities
condprob.fn | Working function to generate conditional probability values
condprob.impute | End function for conditional probability
cor.JGR | Dialog box for computing a correlation matrix
datamerge.JGR | Merge data dialog for JGR
docbook | General function for preparing output
docbook.data.frame | Prepare summary output from a data frame
docbook.default | General function for preparing output
docbook.glm | Prepare output from glm
docbook.glm.summary | Prepare summary output from glm
docbook.hmtestp | Prepare summary output from hmtest
docbook.htest | Prepare summary output from htest
docbook.lm | Prepare output from lm
docbook.lm.summary | Prepare summary output from lm
docbook.try | Try a docbook
genResultSpace | Make new space for results
gisdt.subset | Subset data frame
glm.JGR | Dialog box for fitting a generalized linear regression model
glm.pred.JGR | Dialog box to apply predictions from a regression model to assess test sites
jgr.removeMenu | Remove menus from JGR interface
JGRMessageBox | Dialog box for predicting env. conditions from biological observations
load.class | Load a new java object
load.menus | Load new CADStat menus
localJGRError | Output error from JGR
pca.fa.JGR | Dialog box for calculating a principle component analysis
resample | Resample for cond prob
rpart.JGR | Dialog box for classification and regression trees
rq.JGR | Dialog box for calculating a quantile regression
rq.plot.JGR | Plot quantile regression
scatterplot2 | Draws a scatterplot based on GUI inputs
scatterplot2.JGR | Draws a scatterplot of bivariate data
setVisible | Make something visible
text.rpart.JGR | Add text to rpart plot