geomean {FSA} | R Documentation |
Calculates the geometric mean or standard deviation of a vector of numeric values.
geomean(x, na.rm = FALSE, zneg.rm = FALSE) geosd(x, na.rm = FALSE, zneg.rm = FALSE)
x |
Vector of numeric values. |
na.rm |
Logical indicating whether to remove missing values or not. |
zneg.rm |
Logical indicating whether to ignore or remove zero or negative values found in |
The geometric mean is computed by log transforming the raw data in x
, computing the arithmetic mean of the transformed data, and back-transforming this mean to the geometric mean by exponentiating.
The geometric standard deviation is computed by log transforming the raw data in x
, computing the arithmetic standard deviation of the transformed data, and back-transforming this standard deviation to the geometric standard deviation by exponentiating.
A numeric value that is the geometric mean or geometric standard deviation of the numeric values in x
.
This function is largely an implementation of the code suggested by Russell Senior on R-help in November, 1999.
See geometric.mean
in psych and Gmean
for geometric mean calculators. See Gsd
(documented with Gmean
) from DescTools for geometric standard deviation calculators.
## generate random lognormal data d <- rlnorm(500,meanlog=0,sdlog=1) # d has a mean on log scale of 0; thus, gm should be exp(0)~=1 # d has a sd on log scale of 1; thus, gsd should be exp(1)~=2.7 geomean(d) geosd(d) ## Not run: ## Demonstrate handling of zeros and negative values x <- seq(-1,5) # this will given an error geomean(x) # this will only give a warning, but might not be what you want geomean(x,zneg.rm=TRUE) ## End(Not run)