RANN - A fork of the knnFinder package that exposes more of the functionality of Arya and Mount's ANN Library - check results
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RANN

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Version: 2.1.1
Result: ERROR
Check time: 2018-01-26 22:02
* using log directory ''
* using R Under development (unstable) (2018-01-26 r74168)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'RANN/DESCRIPTION' ... OK
* this is package 'RANN' version '2.1.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialized R objects in the sources ... OK
* checking whether package 'RANN' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... NOTE
Non-standard file/directory found at top level:
'test'
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
NB: .First.lib is obsolete and will not be used in R >= 3.0.0
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... WARNING
File 'RANN/libs/RANN.so':
Found '_ZSt4cerr', possibly from 'std::cerr' (C++)
Object: 'ANN.o'
Found '_ZSt4cout', possibly from 'std::cout' (C++)
Object: 'perf.o'
Found 'exit', possibly from 'exit' (C)
Objects: 'ANN.o', 'kd_dump.o'
File 'RANN/libs/RANN.so':
Found no calls to: 'R_registerRoutines', 'R_useDynamicSymbols'

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs.
It is good practice to register native routines and to disable symbol
search.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking examples ... ERROR
Running examples in 'RANN-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: nn
> ### Title: Near Neighbour Search
> ### Aliases: nn nn2
> ### Keywords: nonparametric
>
> ### ** Examples
>
> # A noisy sine wave example
> x1 <- runif(100, 0, 2*pi)
> x2 <- runif(100, 0,3)
> e <- rnorm(100, sd=sqrt(0.075))
> y <- sin(x1) + 2*cos(x2) + e
> DATA <- data.frame(x1, x2, y)
> nearest <- nn(DATA)
Error in .C("get_NN", as.matrix(data), as.integer(mask), as.integer(num.inputs), :
"get_NN" not available for .C() for package "RANN"
Calls: nn
Execution halted
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR, 1 WARNING, 2 NOTEs
See
'/00check.log'
for details.


Installation log: 00install.out

Distribution log

SVN checkout/GIT clone log