FastXML

About FastXML
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Package R docs

Version: 0.1-0
Result: WARNING
Check time: 2018-01-24 20:19

* using log directory ''
* using R Under development (unstable) (2018-01-24 r74156)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'FastXML/DESCRIPTION' ... OK
* this is package 'FastXML' version '0.1-0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialized R objects in the sources ... OK
* checking whether package 'FastXML' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
License components which are templates and need '+ file LICENSE':
MIT
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
$.fxmlDoc $.fxmlNode [[.fxmlDoc [[.fxmlNode names.fxmlDoc
names.fxmlNode
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
'$.fxmlDoc' '$.fxmlNode' '[[.fxmlDoc' '[[.fxmlNode' 'names.fxmlDoc'
'names.fxmlNode'
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking for code/documentation mismatches ... WARNING
Functions or methods with usage in documentation object 'rs' but not in code:
copy

* checking Rd \usage sections ... WARNING
Objects in \usage without \alias in documentation object 'rs':
'copy'

Functions with \usage entries need to have the appropriate \alias
entries, and all their arguments documented.
The \usage entries must correspond to syntactically valid R code.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... NOTE
File 'FastXML/libs/FastXML.so':
Found no calls to: 'R_registerRoutines', 'R_useDynamicSymbols'

It is good practice to register native routines and to disable symbol
search.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 3 WARNINGs, 4 NOTEs
See
'/00check.log'
for details.

Installation log: 00install.out

Distribution log

SVN checkout/GIT clone log

Build log for Windows (R 2.11.x)

* checking for file 'FastXML/DESCRIPTION' ... OK
* preparing 'FastXML':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
WARNING: some HTML links may not be found
* installing *source* package 'FastXML' ...
** libs
making DLL ...
make: xml2-config: Command not found
gcc -I"c:/PROGRA~1/r/R-211~1.0/include" -O3 -Wall -std=gnu99 -c xml.c -o xml.o
xml.c:7:27: error: libxml/parser.h: No such file or directory
xml.c:8:25: error: libxml/tree.h: No such file or directory
xml.c: In function 'xmlDocRFinalizer':
xml.c:15: error: 'xmlDocPtr' undeclared (first use in this function)
xml.c:15: error: (Each undeclared identifier is reported only once
xml.c:15: error: for each function it appears in.)
xml.c:15: error: expected ';' before 'doc'
xml.c:16: error: 'doc' undeclared (first use in this function)
xml.c:16: warning: implicit declaration of function 'xmlFreeDoc'
xml.c: In function 'xml_parse':
xml.c:34: error: 'xmlDocPtr' undeclared (first use in this function)
xml.c:34: error: expected ';' before 'doc'
xml.c:44: error: 'doc' undeclared (first use in this function)
xml.c:44: warning: implicit declaration of function 'xmlReadFile'
xml.c: At top level:
xml.c:54: error: expected ')' before '*' token
xml.c:68: error: expected ')' before '*' token
xml.c: In function 'xml_root':
xml.c:84: error: 'xmlDocPtr' undeclared (first use in this function)
xml.c:84: error: expected ';' before 'doc'
xml.c:88: error: 'doc' undeclared (first use in this function)
xml.c:91: warning: implicit declaration of function 'node2SEXP'
xml.c:91: warning: implicit declaration of function 'xmlDocGetRootElement'
xml.c:91: warning: return makes pointer from integer without a cast
xml.c: In function 'xml_children':
xml.c:95: error: 'xmlNode' undeclared (first use in this function)
xml.c:95: error: 'node' undeclared (first use in this function)
xml.c:95: error: 'cn' undeclared (first use in this function)
xml.c:95: warning: left-hand operand of comma expression has no effect
xml.c:101: error: expected expression before ')' token
xml.c:105: error: 'XML_ELEMENT_NODE' undeclared (first use in this function)
xml.c:114: warning: passing argument 3 of 'SET_VECTOR_ELT' makes pointer from integer without a cast
xml.c: In function 'xml_attributes':
xml.c:124: error: 'xmlNode' undeclared (first use in this function)
xml.c:124: error: 'node' undeclared (first use in this function)
xml.c:125: error: 'xmlAttr' undeclared (first use in this function)
xml.c:125: error: 'a' undeclared (first use in this function)
xml.c:131: error: expected expression before ')' token
xml.c: In function 'xml_attr':
xml.c:167: error: 'xmlNode' undeclared (first use in this function)
xml.c:167: error: 'node' undeclared (first use in this function)
xml.c:168: error: 'xmlAttr' undeclared (first use in this function)
xml.c:168: error: 'a' undeclared (first use in this function)
xml.c:173: error: expected expression before ')' token
xml.c:184: warning: implicit declaration of function 'attr2SEXP'
xml.c:184: warning: return makes pointer from integer without a cast
xml.c: In function 'xml_attr_names':
xml.c:188: error: 'xmlNode' undeclared (first use in this function)
xml.c:188: error: 'node' undeclared (first use in this function)
xml.c:189: error: 'xmlAttr' undeclared (first use in this function)
xml.c:189: error: 'a' undeclared (first use in this function)
xml.c:195: error: expected expression before ')' token
xml.c: In function 'xml_child':
xml.c:210: error: 'xmlNode' undeclared (first use in this function)
xml.c:210: error: 'node' undeclared (first use in this function)
xml.c:210: error: 'a' undeclared (first use in this function)
xml.c:210: warning: left-hand operand of comma expression has no effect
xml.c:215: error: expected expression before ')' token
xml.c:226: warning: return makes pointer from integer without a cast
xml.c: In function 'xml_children_names':
xml.c:230: error: 'xmlNode' undeclared (first use in this function)
xml.c:230: error: 'node' undeclared (first use in this function)
xml.c:230: error: 'a' undeclared (first use in this function)
xml.c:230: warning: left-hand operand of comma expression has no effect
xml.c:236: error: expected expression before ')' token
xml.c: In function 'xml_node_name':
xml.c:251: error: 'xmlNode' undeclared (first use in this function)
xml.c:251: error: 'node' undeclared (first use in this function)
xml.c:256: error: expected expression before ')' token
xml.c: In function 'xml_node_content':
xml.c:263: error: 'xmlNode' undeclared (first use in this function)
xml.c:263: error: 'node' undeclared (first use in this function)
xml.c:268: error: expected expression before ')' token
xml.c: In function 'xml_node_info':
xml.c:279: error: 'xmlNode' undeclared (first use in this function)
xml.c:279: error: 'node' undeclared (first use in this function)
xml.c:279: error: 'n' undeclared (first use in this function)
xml.c:279: warning: left-hand operand of comma expression has no effect
xml.c:280: error: 'xmlAttr' undeclared (first use in this function)
xml.c:280: error: 'a' undeclared (first use in this function)
xml.c:283: error: expected expression before ')' token
make: *** [xml.o] Error 1
... done
ERROR: compilation failed for package 'FastXML'
* removing 'c:/tmp/Rinst185652233/FastXML'
ERROR
* installation failed

Build log for Windows 64-bit (R 2.11.x)

Build log for Mac OS X 10.5 (R 2.16.x)

* installing *source* package 'FastXML' ...
** libs
*** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -DNDEBUG -I/usr/local/include -I/usr/include/libxml2 -fPIC -g -O2 -c xml.c -o xml.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o FastXML.so xml.o -L/usr/lib -lxml2 -lz -lpthread -licucore -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/FastXML/libs/i386
*** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -DNDEBUG -I/usr/local/include -I/usr/include/libxml2 -fPIC -g -O2 -c xml.c -o xml.o
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o FastXML.so xml.o -L/usr/lib -lxml2 -lz -lpthread -licucore -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/FastXML/libs/ppc
*** arch - x86_64
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/usr/local/include -I/usr/include/libxml2 -fPIC -g -O2 -c xml.c -o xml.o
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o FastXML.so xml.o -L/usr/lib -lxml2 -lz -lpthread -licucore -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/FastXML/libs/x86_64
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
*** arch - i386
*** arch - ppc
*** arch - x86_64
packaged installation of 'FastXML' as 'FastXML_0.1-0.tgz'

* DONE (FastXML)

Build log for Windows 7 (R 3.0.x)

(FastXML 0.1-0)
* installing to library 'z:/rforge/Rlib/win7-3.0'
* installing *source* package 'FastXML' ...
** libs

*** arch - i386
make: xml2-config: Command not found
gcc -m32 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O3 -Wall -std=gnu99 -mtune=core2 -c xml.c -o xml.o
xml.c:7:27: fatal error: libxml/parser.h: No such file or directory
compilation terminated.
make: *** [xml.o] Error 1
ERROR: compilation failed for package 'FastXML'
* removing 'z:/rforge/Rlib/win7-3.0/FastXML'