IMA - IMA(Illumina Methylation Analyzer) is a package designed to automate the pipeline for analyzing site-level and region-level methylation changes in epigenetic studies utilizing the 450K DNA methylation microarray. - check results


About IMA
SVN access
Check results

Version: 3.1.2
Result: ERROR
Check time: 2014-06-30 13:18
* using log directory ''
* using R Under development (unstable) (2014-06-27 r66046)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: ISO8859-1
* checking for file 'IMA/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'IMA' version '3.1.2'
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'WriteXLS' 'bioDist'

Depends: includes the non-default packages:
'WriteXLS' 'limma' 'MASS' 'bioDist' 'preprocessCore' 'dplR'
Adding so many packages to the search path is excessive and importing
selectively is preferable.

See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.

Distribution log

SVN checkout/GIT clone log

Build log for Mac OS X 10.5 (R 2.16.x)

ERROR: dependencies ‘WriteXLS’, ‘limma’, ‘bioDist’, ‘preprocessCore’ are not available for package ‘IMA’
* removing ‘/Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/IMA’

Build log for Windows 7 (R 3.0.x)

(IMA 3.1.2)
* installing to library 'z:/rforge/Rlib/win7-3.0'
ERROR: dependencies 'limma', 'bioDist', 'preprocessCore' are not available for package 'IMA'
* removing 'z:/rforge/Rlib/win7-3.0/IMA'