FSA - Fisheries stock assessment methods. - check results
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FSA

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Version: 0.2-0
Result: OK
Check time: 2010-09-04 15:35
* checking for working pdflatex ... OK
* using log directory ''
* using R version 2.11.0 (2010-04-22)
* using session charset: ISO8859-1
* checking for file 'FSA/DESCRIPTION' ... OK
* this is package 'FSA' version '0.2-0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking for executable files ... OK
* checking whether package 'FSA' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
emp: no visible binding for global variable 'fLCat'
emp: no visible binding for global variable 'n'
rsdVal: no visible binding for global variable 'RSDlit'
srStarts.default: no visible binding for global variable 'x'
vbStarts.default: no visible binding for global variable 'x'
wsVal: no visible binding for global variable 'WSlit'
wsValidate : EmpQ: no visible binding for global variable 'fLCat'
wsValidate : EmpQ: no visible binding for global variable 'n'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking examples ... OK
* checking PDF version of manual ... OK


Installation log: 00install.out


Build log for Windows (R 2.11.x)

* checking for file 'FSA/DESCRIPTION' ... OK
* preparing 'FSA':
* checking DESCRIPTION meta-information ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
WARNING: some HTML links may not be found
* installing *source* package 'FSA' ...
** R
** inst
** preparing package for lazy loading
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.

gdata: Unable to load perl libaries needed by read.xls()
gdata: to support 'XLSX' (Excel 2007+) files.

gdata: Run the function 'installXLSXsupport()'
gdata: to automatically download and install the perl
gdata: libaries needed to support Excel XLS and XLSX formats.

Attaching package: 'gdata'

The following object(s) are masked from 'package:utils':

object.size



##########################################
## FSAdata package by Derek H. Ogle ##
## type ?FSAdata for documentation. ##
##########################################


nlstools: diagnostic tools for nonlinear regression models
version 0.0-10

Warning: package 'plotrix' was built under R version 2.11.1
Warning: package 'quantreg' was built under R version 2.11.1
Loading required package: SparseM
Warning: package 'SparseM' was built under R version 2.11.1
Package SparseM (0.86) loaded.
To cite, see citation("SparseM")


Attaching package: 'SparseM'

The following object(s) are masked from 'package:base':

backsolve


Attaching package: 'quantreg'

The following object(s) are masked from 'package:utils':

vignette

Loading required package: plyr
Warning: package 'plyr' was built under R version 2.11.1
Loading Tcl/Tk interface ... done


##########################################
## NCStats package by Derek H. Ogle ##
## type ?NCStats for documentation. ##
##########################################

** help
*** installing help indices
** building package indices ...
** MD5 sums
** testing if installed package can be loaded


##########################################
## FSA package by Derek H. Ogle ##
## type ?FSA for documentation. ##
##########################################

packaged installation of 'FSA' as FSA_0.2-0.zip

* DONE (FSA)


Build log for Mac OS X 10.4 (R 2.9.x)

* checking for file 'FSA/DESCRIPTION' ... OK
* preparing 'FSA':
* checking DESCRIPTION meta-information ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
* Installing *source* package 'FSA' ...
** R
** inst
** preparing package for lazy loading
Loading required package: gdata
Warning in library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc) :
there is no package called 'gdata'
Error : package 'gdata' could not be loaded
ERROR: lazy loading failed for package 'FSA'
* Removing '/private/tmp/Rinst1301023836/FSA'
ERROR
* installation failed


Build log for Windows 64-bit (R 2.11.x)

* checking for file 'FSA/DESCRIPTION' ... OK
* preparing 'FSA':
* checking DESCRIPTION meta-information ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
WARNING: some HTML links may not be found
* installing *source* package 'FSA' ...
** R
** inst
** preparing package for lazy loading
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.

gdata: Unable to load perl libaries needed by read.xls()
gdata: to support 'XLSX' (Excel 2007+) files.

gdata: Run the function 'installXLSXsupport()'
gdata: to automatically download and install the perl
gdata: libaries needed to support Excel XLS and XLSX formats.

Attaching package: 'gdata'

The following object(s) are masked from 'package:utils':

object.size



##########################################
## FSAdata package by Derek H. Ogle ##
## type ?FSAdata for documentation. ##
##########################################


nlstools: diagnostic tools for nonlinear regression models
version 0.0-10

Warning: package 'plotrix' was built under R version 2.11.1
Warning: package 'quantreg' was built under R version 2.11.1
Loading required package: SparseM
Package SparseM (0.85) loaded.
To cite, see citation("SparseM")


Attaching package: 'SparseM'

The following object(s) are masked from 'package:base':

backsolve


Attaching package: 'quantreg'

The following object(s) are masked from 'package:utils':

vignette

Loading required package: plyr
Warning: package 'plyr' was built under R version 2.11.1
Loading Tcl/Tk interface ... done
Error in loadNamespace(i, c(lib.loc, .libPaths())) :
there is no package called 'NCStats'
ERROR: lazy loading failed for package 'FSA'
* removing 'c:/tmp/Rinst300084506/FSA'
ERROR
* installation failed


Build log for Mac OS X 10.5 (R 2.11.x)

* checking for file 'FSA/DESCRIPTION' ... OK
* preparing 'FSA':
* checking DESCRIPTION meta-information ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
* installing *source* package 'FSA' ...
** R
** inst
** preparing package for lazy loading
Loading required package: gdata

Attaching package: 'gdata'

The following object(s) are masked from 'package:utils':

object.size



##########################################
## FSAdata package by Derek H. Ogle ##
## type ?FSAdata for documentation. ##
##########################################

Loading required package: SparseM
Package SparseM (0.85) loaded.
To cite, see citation("SparseM")


Attaching package: 'SparseM'

The following object(s) are masked from 'package:base':

backsolve


Attaching package: 'quantreg'

The following object(s) are masked from 'package:utils':

vignette

Loading required package: plyr
Loading Tcl/Tk interface ... done


##########################################
## NCStats package by Derek H. Ogle ##
## type ?NCStats for documentation. ##
##########################################

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded


##########################################
## FSA package by Derek H. Ogle ##
## type ?FSA for documentation. ##
##########################################

packaged installation of 'FSA' as FSA_0.1-3_R_i386-apple-darwin9.8.0.tar.gz

* DONE (FSA)